Todo
Improve autoapi module
circadapt.components.patch
Patch objects.
Module Contents
Classes
Patch2022 is based on Patch in Walmsley 2015. |
Objects
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class
circadapt.components.patch.Patch2022(model, objects=None, wall_locs=None) -
Bases:
circadapt.components.ComponentPatch2022 is based on Patch in Walmsley 2015.
Parameters
- AmRef: float
Reference wall area at \(l_{s} = l_{s,ref}\).
- VWall: float
Wall volume
- vMax: float
Maximum shortening velocity
- len_se: float
Length of the series elastic element, i.e. \(l_{s} -l_{si}\) for which stress is zero.
- LsRef: float
Reference sarcomere length for which at \(A_m (l_{s,ref}) = A_{m,ref}\).
- Ls0Pas: float
Zero passive stress length
- dLsPas: float
- SfPas: float
- k1: float
- TR: float
- TD: float
- TimeAct: float
- SfAct: float
- SfPas: float
- k1: float
- dT: float
- CRest: float
- Lsi0Act: float
- LDAD: float
- ADO: float
- LDCC: float
- SfPasMaxT: float
- SfPasActT: float
- FacSfActT: float
- LsPasActT: float
- adapt_gamma: bool
Signals
Signals are arrays. Each point in the array represents a point in time with step-size controlled by the solver.
- Ls: array
Sarcomere length
- Lsi: array
State variable: Intrinsic sarcomere length
- LsiDot: array
State variable: Intrinsic sarcomere length time-derivative
- C: array
State variable: contraction curve
- CDot: array
State variable: contraction time-derivative
- Am: array
Patch mid-wall area
- Am0: array
Patch mid-wall zero-stress area
- Ef: array
Natural strain
- T: array
Mid-wall tension
- DADT: array
Area-tension derivative
- Sf: array
Total fibre stress at mid-wall
- SfPasT: array
Total passive stress at mid-wall
- SfEcm: array
Total ECM stress at mid-wall
- DSfDEf: array
Total stiffness coefficient
- DSfPasDEf: array
Total passive stiffness coefficient
- SfEcmMax: array
Adaptation: Maximum ECM stress
- SfActMax: array
Adaptation: maximum active stress
- SfPasAct: array
Adaptation: active-weighted passive stress
- LsPasAct: array
Adaptation: active-weigthed sarcomere length
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parameters= ['AmRef', 'VWall', 'vMax', 'len_se', 'LsRef', 'Ls0Pas', 'dLsPas', 'SfPas', 'k1', 'TR', 'TD',...
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signals= ['Ls', 'Lsi', 'LsiDot', 'C', 'CDot', 'Am', 'Am0', 'Ef', 'T', 'DADT', 'Sf', 'SfPasT', 'SfEcm',...
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parameter_on_set
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build()
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get_all_patches() -
Get all patches of the walls included in this pointer object.
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add_object(o)